ARC Centre of Excellence for Plant Energy Biology

MPIC — MDM1 – Medtr4g012920 InterPro Results

Sequences for Medicago truncatula were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.

Database Detected Description Start End E-Value
InterPro IPR001683 Phox homologous domain:
Gene3D G3DSA:3.30.1520.10 719 832 7.1E-25
Pfam PF00787 PX domain 735 830 4.1E-19
ProSiteProfiles PS50195 PX domain profile. 722 834 0.0
SMART SM00312 PhoX homologous domain, present in p47phox and p40phox. 726 830 2.700001836E-15
SUPERFAMILY SSF64268 723 831 0.0
InterPro IPR003114 Phox-associated domain:
Pfam PF02194 PXA domain 106 329 7.0E-46
ProSiteProfiles PS51207 PXA domain profile. 106 333 0.0
InterPro IPR013937 Sorting nexin, C-terminal:
Pfam PF08628 Sorting nexin C terminal 1122 1186 1.4E-8
Pfam PF08628 Sorting nexin C terminal 982 1029 1.1E-6
InterPro No IPR Unintegrated signatures:
PANTHER PTHR22999 9 1220 0.0
PANTHER PTHR22999:SF19 9 1220 0.0
Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 1 20 -
Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 61 252 -
Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 275 1225 -
Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 38 42 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 253 274 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 21 37 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 43 60 -
TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 43 62 -
TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 21 38 -
TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 241 263 -

InterPro
Clickable SVG
Courtesy of EMBL-EBI

Sequences (FASTA)