ARC Centre of Excellence for Plant Energy Biology

MPIC — MDM1 – LOC_Os11g06040 InterPro Results

Sequences for Oryza sativa were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.

Database Detected Description Start End E-Value
InterPro IPR001683 Phox homologous domain:
Gene3D G3DSA:3.30.1520.10 595 707 3.9E-24
Pfam PF00787 PX domain 600 702 2.6E-18
ProSiteProfiles PS50195 PX domain profile. 596 708 0.0
SMART SM00312 PhoX homologous domain, present in p47phox and p40phox. 594 704 6.599998525E-14
SUPERFAMILY SSF64268 591 706 0.0
InterPro IPR003114 Phox-associated domain:
Pfam PF02194 PXA domain 146 327 5.0E-53
ProSiteProfiles PS51207 PXA domain profile. 146 329 0.0
InterPro IPR013937 Sorting nexin, C-terminal:
Pfam PF08628 Sorting nexin C terminal 892 1035 3.0E-18
InterPro No IPR Unintegrated signatures:
PANTHER PTHR22999 3 1067 0.0
PANTHER PTHR22999:SF18 3 1067 0.0
Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 1 19 -
Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 98 1077 -
Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 39 79 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 80 97 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 20 38 -
TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 20 39 -

InterPro
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Courtesy of EMBL-EBI

Sequences (FASTA)