ARC Centre of Excellence for Plant Energy Biology

MPIC — MDM1 – LOC_Os05g50660 InterPro Results

Sequences for Oryza sativa were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.

Database Detected Description Start End E-Value
InterPro IPR001683 Phox homologous domain:
Gene3D G3DSA:3.30.1520.10 692 800 1.2E-22
Pfam PF00787 PX domain 697 799 1.9E-18
ProSiteProfiles PS50195 PX domain profile. 691 803 0.0
SMART SM00312 PhoX homologous domain, present in p47phox and p40phox. 689 799 2.19999901E-17
SUPERFAMILY SSF64268 691 803 0.0
InterPro IPR003114 Phox-associated domain:
Pfam PF02194 PXA domain 112 289 2.2E-47
ProSiteProfiles PS51207 PXA domain profile. 112 295 0.0
InterPro IPR013937 Sorting nexin, C-terminal:
Pfam PF08628 Sorting nexin C terminal 966 1098 4.3E-34
InterPro No IPR Unintegrated signatures:
PANTHER PTHR22999 12 1132 0.0
PANTHER PTHR22999:SF19 12 1132 0.0
Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 1 23 -
Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 63 1136 -
Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 41 45 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 46 62 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 24 40 -
TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 24 46 -

InterPro
Clickable SVG
Courtesy of EMBL-EBI

Sequences (FASTA)