ARC Centre of Excellence for Plant Energy Biology

MPIC — MDM1 – GRMZM2G026442_T01 InterPro Results

Sequences for Zea mays were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.

Database Detected Description Start End E-Value
InterPro IPR001683 Phox homologous domain:
Gene3D G3DSA:3.30.1520.10 545 664 1.2E-25
Pfam PF00787 PX domain 559 660 6.1E-18
ProSiteProfiles PS50195 PX domain profile. 553 665 0.0
SMART SM00312 PhoX homologous domain, present in p47phox and p40phox. 553 661 1.099999091E-14
SUPERFAMILY SSF64268 547 662 0.0
InterPro IPR003114 Phox-associated domain:
Pfam PF02194 PXA domain 106 286 1.7E-49
ProSiteProfiles PS51207 PXA domain profile. 106 289 0.0
InterPro IPR013937 Sorting nexin, C-terminal:
Pfam PF08628 Sorting nexin C terminal 848 991 3.8E-18
InterPro No IPR Unintegrated signatures:
PANTHER PTHR22999 5 1023 0.0
PANTHER PTHR22999:SF18 5 1023 0.0
Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 1 14 -
Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 58 1033 -
Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 35 39 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 15 34 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 40 57 -
TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 20 37 -

InterPro
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Courtesy of EMBL-EBI

Sequences (FASTA)