ARC Centre of Excellence for Plant Energy Biology

MPIC — MDM1 – Eucgr.F03028 InterPro Results

Sequences for Eucalyptus grandis were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.

Database Detected Description Start End E-Value
InterPro IPR001683 Phox homologous domain:
Gene3D G3DSA:3.30.1520.10 671 781 2.7E-24
Pfam PF00787 PX domain 683 777 1.3E-18
ProSiteProfiles PS50195 PX domain profile. 671 783 0.0
SMART SM00312 PhoX homologous domain, present in p47phox and p40phox. 669 779 1.200001175E-14
SUPERFAMILY SSF64268 673 780 0.0
InterPro IPR003114 Phox-associated domain:
Pfam PF02194 PXA domain 103 282 4.0E-46
ProSiteProfiles PS51207 PXA domain profile. 103 286 0.0
InterPro IPR013937 Sorting nexin, C-terminal:
Pfam PF08628 Sorting nexin C terminal 909 1048 3.4E-25
InterPro No IPR Unintegrated signatures:
PANTHER PTHR22999 1 1084 0.0
PANTHER PTHR22999:SF19 1 1084 0.0
Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 1 19 -
Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 59 1090 -
Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 36 40 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 41 58 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 20 35 -
TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 21 43 -

InterPro
Clickable SVG
Courtesy of EMBL-EBI

Sequences (FASTA)