ARC Centre of Excellence for Plant Energy Biology

MPIC — MDM1 – Cucsa.359160.1 InterPro Results

Sequences for Cucumis sativus were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.

Database Detected Description Start End E-Value
InterPro IPR001683 Phox homologous domain:
Gene3D G3DSA:3.30.1520.10 664 784 6.7E-24
Pfam PF00787 PX domain 686 782 7.4E-20
ProSiteProfiles PS50195 PX domain profile. 673 786 16.413
SMART SM00312 PhoX homologous domain, present in p47phox and p40phox. 671 782 5.1E-14
SUPERFAMILY SSF64268 675 783 1.96E-22
InterPro IPR003114 Phox-associated domain:
Pfam PF02194 PXA domain 107 283 1.7E-40
ProSiteProfiles PS51207 PXA domain profile. 104 287 36.123
InterPro IPR013937 Sorting nexin, C-terminal:
Pfam PF08628 Sorting nexin C terminal 944 1080 1.1E-22
InterPro IPR013996 PX-associated, sorting nexin 13:
SMART SM00313 Domain associated with PX domains 108 287 9.0E-4
InterPro No IPR Unintegrated signatures:
PANTHER PTHR22999 7 1114 0.0
PANTHER PTHR22999:SF19 7 1114 0.0
Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 59 1070 -
Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 1 19 -
Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 1098 1121 -
Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 36 40 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 1071 1097 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 41 58 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 20 35 -
TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 21 43 -

InterPro
Clickable SVG
Courtesy of EMBL-EBI

Sequences (FASTA)