ARC Centre of Excellence for Plant Energy Biology

MPIC — MDM1 – Cucsa.220190 InterPro Results

Sequences for Cucumis sativus were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.

Database Detected Description Start End E-Value
InterPro IPR001683 Phox homologous domain:
Gene3D G3DSA:3.30.1520.10 587 684 4.0E-24
Pfam PF00787 PX domain 584 681 3.0E-20
ProSiteProfiles PS50195 PX domain profile. 573 685 16.793
SMART SM00312 PhoX homologous domain, present in p47phox and p40phox. 573 681 2.4E-12
SUPERFAMILY SSF64268 581 684 2.22E-22
InterPro IPR003114 Phox-associated domain:
Pfam PF02194 PXA domain 105 281 2.3E-53
ProSiteProfiles PS51207 PXA domain profile. 105 288 49.195
InterPro IPR013937 Sorting nexin, C-terminal:
Pfam PF08628 Sorting nexin C terminal 869 1006 1.6E-18
InterPro IPR013996 PX-associated, sorting nexin 13:
SMART SM00313 Domain associated with PX domains 105 288 6.8E-6
InterPro No IPR Unintegrated signatures:
PANTHER PTHR22999 1 1040 7.9E-282
PANTHER PTHR22999:SF18 1 1040 7.9E-282
Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 1 15 -
Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 58 1043 -
Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 34 38 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 16 33 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 39 57 -
TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 19 36 -

InterPro
Clickable SVG
Courtesy of EMBL-EBI

Sequences (FASTA)