MPIC
Sequences for Brassica rapa were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.
| Database | Detected | Description | Start | End | E-Value |
|---|---|---|---|---|---|
| InterPro | IPR001683 | Phox homologous domain: | |||
| Gene3D | G3DSA:3.30.1520.10 | 608 | 721 | 3.8E-23 | |
| Pfam | PF00787 | PX domain | 624 | 718 | 2.3E-17 |
| ProSiteProfiles | PS50195 | PX domain profile. | 610 | 722 | 0.0 |
| SMART | SM00312 | PhoX homologous domain, present in p47phox and p40phox. | 614 | 718 | 5.20000089E-12 |
| SUPERFAMILY | SSF64268 | 610 | 721 | 0.0 | |
| InterPro | IPR003114 | Phox-associated domain: | |||
| Pfam | PF02194 | PXA domain | 105 | 284 | 1.7E-49 |
| ProSiteProfiles | PS51207 | PXA domain profile. | 105 | 288 | 0.0 |
| InterPro | IPR013937 | Sorting nexin, C-terminal: | |||
| Pfam | PF08628 | Sorting nexin C terminal | 856 | 977 | 1.1E-26 |
| InterPro | No IPR | Unintegrated signatures: | |||
| PANTHER | PTHR22999 | 1 | 1011 | 0.0 | |
| PANTHER | PTHR22999:SF19 | 1 | 1011 | 0.0 | |
| Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 1 | 20 | - |
| Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 60 | 1017 | - |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 37 | 41 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 21 | 36 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 42 | 59 | - |
| TMHMM | TMhelix | Region of a membrane-bound protein predicted to be embedded in the membrane. | 21 | 43 | - |
