ARC Centre of Excellence for Plant Energy Biology

MPIC — MDM1 – AT2G15900.1 InterPro Results

Sequences for Arabidopsis thaliana were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.

Database Detected Description Start End E-Value
InterPro IPR001683 Phox homologous domain:
Gene3D G3DSA:3.30.1520.10 506 621 2.7E-25
Pfam PF00787 PX domain 520 617 8.8E-20
ProSiteProfiles PS50195 PX domain profile. 511 623 0.0
SMART SM00312 PhoX homologous domain, present in p47phox and p40phox. 511 619 1.39999892E-10
SUPERFAMILY SSF64268 512 619 0.0
InterPro IPR003114 Phox-associated domain:
Pfam PF02194 PXA domain 105 289 2.4E-60
ProSiteProfiles PS51207 PXA domain profile. 105 288 0.0
InterPro IPR013937 Sorting nexin, C-terminal:
Pfam PF08628 Sorting nexin C terminal 815 958 5.9E-17
InterPro No IPR Unintegrated signatures:
PANTHER PTHR22999 1 992 0.0
PANTHER PTHR22999:SF18 1 992 0.0
Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 1 19 -
Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 42 994 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 20 41 -
TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 19 41 -

InterPro
Clickable SVG
Courtesy of EMBL-EBI

Sequences (FASTA)