ARC Centre of Excellence for Plant Energy Biology

MPIC — MDM1 – AT1G15240.2 InterPro Results

Sequences for Arabidopsis thaliana were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.

Database Detected Description Start End E-Value
InterPro IPR001683 Phox homologous domain:
Gene3D G3DSA:3.30.1520.10 609 722 1.7E-22
Pfam PF00787 PX domain 620 719 5.0E-17
ProSiteProfiles PS50195 PX domain profile. 611 723 0.0
SMART SM00312 PhoX homologous domain, present in p47phox and p40phox. 615 719 7.800000169E-12
SUPERFAMILY SSF64268 612 722 0.0
InterPro IPR003114 Phox-associated domain:
Pfam PF02194 PXA domain 106 285 1.3E-47
ProSiteProfiles PS51207 PXA domain profile. 106 289 0.0
InterPro IPR013937 Sorting nexin, C-terminal:
Pfam PF08628 Sorting nexin C terminal 858 979 1.8E-26
InterPro No IPR Unintegrated signatures:
PANTHER PTHR22999 1 1013 0.0
PANTHER PTHR22999:SF19 1 1013 0.0
Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 1 20 -
Phobius CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. 60 1020 -
Phobius NON_CYTOPLASMIC_DOMAIN Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. 37 41 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 42 59 -
Phobius TRANSMEMBRANE Region of a membrane-bound protein predicted to be embedded in the membrane. 21 36 -
TMHMM TMhelix Region of a membrane-bound protein predicted to be embedded in the membrane. 21 43 -

InterPro
Clickable SVG
Courtesy of EMBL-EBI

Sequences (FASTA)