ARC Centre of Excellence for Plant Energy Biology

MPIC — IMP1,IMP2 – Potri.006G160000.1 InterPro Results

Sequences for Populus trichocarpa were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.

Database	Detected	Description	Start	End	E-Value
InterPro	IPR000223	Peptidase S26A, signal peptidase I:
PANTHER	PTHR12383		125	302	1.4E-92
PRINTS	PR00727	Bacterial leader peptidase 1 (S26A) family signature	211	223	3.852244E-18
PRINTS	PR00727	Bacterial leader peptidase 1 (S26A) family signature	255	274	3.852244E-18
PRINTS	PR00727	Bacterial leader peptidase 1 (S26A) family signature	152	168	3.852244E-18
TIGRFAM	TIGR02227	sigpep_I_bact: signal peptidase I	137	294	6.2E-38
InterPro	IPR015927	Peptidase S24/S26A/S26B/S26C:
SUPERFAMILY	SSF51306		150	301	2.93E-47
InterPro	IPR019533	Peptidase S26:
Pfam	PF10502	Signal peptidase, peptidase S26	188	287	3.6E-14
InterPro	IPR019756	Peptidase S26A, signal peptidase I, serine active site:
ProSitePatterns	PS00501	Signal peptidases I serine active site.	161	168	-
InterPro	IPR019758	Peptidase S26A, signal peptidase I, conserved site:
ProSitePatterns	PS00761	Signal peptidases I signature 3.	260	273	-
InterPro	IPR028360	Peptidase S24/S26, beta-ribbon domain:
Gene3D	G3DSA:2.10.109.10		149	221	6.2E-39
Gene3D	G3DSA:2.10.109.10		255	300	6.2E-39
InterPro	No IPR	Unintegrated signatures:
PANTHER	PTHR12383:SF15		125	302	1.4E-92
Phobius	NON_CYTOPLASMIC_DOMAIN	Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	17	319	-
Phobius	SIGNAL_PEPTIDE	Signal peptide region	1	16	-
Phobius	SIGNAL_PEPTIDE_C_REGION	C-terminal region of a signal peptide.	12	16	-
Phobius	SIGNAL_PEPTIDE_H_REGION	Hydrophobic region of a signal peptide.	3	11	-
Phobius	SIGNAL_PEPTIDE_N_REGION	N-terminal region of a signal peptide.	1	2	-

Clickable SVG
Courtesy of EMBL-EBI

Sequences (FASTA)