MPIC
Sequences for Capsella rubella were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.
| Database | Detected | Description | Start | End | E-Value |
|---|---|---|---|---|---|
| InterPro | IPR000223 | Peptidase S26A, signal peptidase I: | |||
| PANTHER | PTHR12383 | 20 | 287 | 0.0 | |
| PRINTS | PR00727 | Bacterial leader peptidase 1 (S26A) family signature | 244 | 263 | 1.0E-17 |
| PRINTS | PR00727 | Bacterial leader peptidase 1 (S26A) family signature | 200 | 212 | 1.0E-17 |
| PRINTS | PR00727 | Bacterial leader peptidase 1 (S26A) family signature | 141 | 157 | 1.0E-17 |
| TIGRFAM | TIGR02227 | sigpep_I_bact: signal peptidase I | 126 | 284 | 1.9E-38 |
| InterPro | IPR015927 | Peptidase S24/S26A/S26B/S26C: | |||
| SUPERFAMILY | SSF51306 | 139 | 289 | 0.0 | |
| InterPro | IPR019533 | Peptidase S26: | |||
| Pfam | PF10502 | Signal peptidase, peptidase S26 | 177 | 277 | 2.5E-13 |
| InterPro | IPR019756 | Peptidase S26A, signal peptidase I, serine active site: | |||
| ProSitePatterns | PS00501 | Signal peptidases I serine active site. | 150 | 157 | - |
| InterPro | IPR019758 | Peptidase S26A, signal peptidase I, conserved site: | |||
| ProSitePatterns | PS00761 | Signal peptidases I signature 3. | 249 | 262 | - |
| InterPro | IPR028360 | Peptidase S24/S26, beta-ribbon domain: | |||
| Gene3D | G3DSA:2.10.109.10 | 138 | 210 | 2.8E-38 | |
| Gene3D | G3DSA:2.10.109.10 | 244 | 289 | 2.8E-38 | |
| InterPro | No IPR | Unintegrated signatures: | |||
| PANTHER | PTHR12383:SF1 | 20 | 287 | 0.0 | |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 22 | 301 | - |
| Phobius | SIGNAL_PEPTIDE | Signal peptide region | 1 | 21 | - |
| Phobius | SIGNAL_PEPTIDE_C_REGION | C-terminal region of a signal peptide. | 18 | 21 | - |
| Phobius | SIGNAL_PEPTIDE_H_REGION | Hydrophobic region of a signal peptide. | 6 | 17 | - |
| Phobius | SIGNAL_PEPTIDE_N_REGION | N-terminal region of a signal peptide. | 1 | 5 | - |
| SignalP_GRAM_POSITIVE | SignalP-TM | 1 | 17 | - | |
