ARC Centre of Excellence for Plant Energy Biology

MPIC — IMP1,IMP2 Transmembrane Helix Domain Predictions

Num_PredHel indicates the number of predicted transmembrane helix domains calculated by DAS and TMHMM predictors (for methods, see MPIC paper). A tally of both predictors is shown first.

Num_PredHel Frequency
1 35
2 4
3 1

1 predicted Species DAS_Num_PredHelTMHMM_Num_PredHel
AT1G29960 Species Arabidopsis thaliana Arabidopsis thaliana 11
AT3G08980 Species Arabidopsis thaliana Arabidopsis thaliana
Bra006087 Species Brassica rapa Brassica rapa
Bra008992 Species Brassica rapa Brassica rapa
Bra009418 Species Brassica rapa Brassica rapa
Bra015061 Species Brassica rapa Brassica rapa
Bra015534 Species Brassica rapa Brassica rapa
Bra021634 Species Brassica rapa Brassica rapa
Bra029738 Species Brassica rapa Brassica rapa
Bra030640 Species Brassica rapa Brassica rapa
Bra031542 Species Brassica rapa Brassica rapa
Bra034045 Species Brassica rapa Brassica rapa
gi|17543654 Species Caenorhabditis elegans Caenorhabditis elegans 1
gi|71982173 Species Caenorhabditis elegans Caenorhabditis elegans
CMB077CT Species Cyanidioschyzon merolae Cyanidioschyzon merolae
CMR326CT Species Cyanidioschyzon merolae Cyanidioschyzon merolae 1
CMR333CT Species Cyanidioschyzon merolae Cyanidioschyzon merolae 1
Cre01.g027100.t1.2 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii 1
g11585.t1 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii 11
g8013.t1 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii 1
Carubv10009515m.g Species Capsella rubella Capsella rubella
Carubv10010481m.g Species Capsella rubella Capsella rubella
Carubv10010481m.g|Carubv10010684m Species Capsella rubella Capsella rubella
Carubv10010493m.g Species Capsella rubella Capsella rubella
Carubv10014271m.g Species Capsella rubella Capsella rubella 1
Carubv10015579m.g Species Capsella rubella Capsella rubella
Carubv10023541m.g Species Capsella rubella Capsella rubella
Cucsa.047590.1 Species Cucumis sativus Cucumis sativus
Cucsa.123370.1 Species Cucumis sativus Cucumis sativus
Cucsa.176310.1 Species Cucumis sativus Cucumis sativus
Cucsa.232550.1 Species Cucumis sativus Cucumis sativus
Cucsa.273860.1 Species Cucumis sativus Cucumis sativus 1
gi|66811204 Species Dictyostelium discoideum Dictyostelium discoideum 21
Eucgr.A00507.1 Species Eucalyptus grandis Eucalyptus grandis 2
Eucgr.C03817.1 Species Eucalyptus grandis Eucalyptus grandis
Eucgr.D00315.1 Species Eucalyptus grandis Eucalyptus grandis
Eucgr.F00038.1 Species Eucalyptus grandis Eucalyptus grandis
Eucgr.F02385.1 Species Eucalyptus grandis Eucalyptus grandis
Eucgr.F03218.1 Species Eucalyptus grandis Eucalyptus grandis
Eucgr.L03207.1 Species Eucalyptus grandis Eucalyptus grandis
Esi0007_0117|Imp1 homolog, Inner Membrane Peptidase complex subunit 1 (186) ;mRNA; f:727509-728975 Species Ectocarpus siliculosus Ectocarpus siliculosus
conserved unknown protein (235) ;mRNA; f:754395-757618|Esi0009_0118 Species Ectocarpus siliculosus Ectocarpus siliculosus
Esi0324_0009|Imp2 homolog, Inner Membrane Peptidase complex subunit 2 (176) ;mRNA; r:30937-33866 Species Ectocarpus siliculosus Ectocarpus siliculosus 1
Glyma04g03840.5 Species Glycine max Glycine max
Glyma05g35480.1 Species Glycine max Glycine max
Glyma07g18060.1 Species Glycine max Glycine max 11
Glyma08g04250.1 Species Glycine max Glycine max 1
Glyma13g25940.1 Species Glycine max Glycine max
Glyma13g25981.1 Species Glycine max Glycine max
Glyma13g26010.1 Species Glycine max Glycine max
Glyma13g26540.1 Species Glycine max Glycine max 1
Glyma13g33660.1 Species Glycine max Glycine max
Glyma15g39140.1 Species Glycine max Glycine max
Glyma18g42910.1 Species Glycine max Glycine max
gi|14211845 Species Homo sapiens Homo sapiens 1
gi|21450679 Species Homo sapiens Homo sapiens
Medtr2g059220.1 Species Medicago truncatula Medicago truncatula
Medtr3g100960.1 Species Medicago truncatula Medicago truncatula 1
Medtr5g007850.1 Species Medicago truncatula Medicago truncatula
Medtr8g039980.1 Species Medicago truncatula Medicago truncatula
Medtr8g039990.1 Species Medicago truncatula Medicago truncatula
Medtr8g040010.1 Species Medicago truncatula Medicago truncatula
Medtr8g040050.1 Species Medicago truncatula Medicago truncatula 1
Medtr8g103470.1 Species Medicago truncatula Medicago truncatula
LOC_Os02g16709.1 Species Oryza sativa Oryza sativa
LOC_Os03g05430.1 Species Oryza sativa Oryza sativa
LOC_Os03g55640.1 Species Oryza sativa Oryza sativa 1
LOC_Os04g08340.1 Species Oryza sativa Oryza sativa
LOC_Os09g28000.1 Species Oryza sativa Oryza sativa
LOC_Os11g40500.1 Species Oryza sativa Oryza sativa
Phpat.009G097900.1 Species Physcomitrella patens Physcomitrella patens
Phpat.012G075300.1 Species Physcomitrella patens Physcomitrella patens
Phpat.020G038400.1 Species Physcomitrella patens Physcomitrella patens 1
Phpat.023G022200.1 Species Physcomitrella patens Physcomitrella patens
Phpat.023G051200.1 Species Physcomitrella patens Physcomitrella patens 1
Potri.001G380400.1 Species Populus trichocarpa Populus trichocarpa
Potri.005G092900.1 Species Populus trichocarpa Populus trichocarpa
Potri.006G157900.1 Species Populus trichocarpa Populus trichocarpa
Potri.006G160000.1 Species Populus trichocarpa Populus trichocarpa
Potri.007G071400.1 Species Populus trichocarpa Populus trichocarpa
Potri.014G036400.1 Species Populus trichocarpa Populus trichocarpa
Potri.016G115100.1 Species Populus trichocarpa Populus trichocarpa
Potri.018G081800.1 Species Populus trichocarpa Populus trichocarpa
29693.m002044|29693.t000082 Species Ricinus communis Ricinus communis 1
29701.m000603|29701.t000024 Species Ricinus communis Ricinus communis
29912.m005509|29912.t000235 Species Ricinus communis Ricinus communis
30026.m001516|30026.t000080 Species Ricinus communis Ricinus communis
30170.m013939|30170.t000351 Species Ricinus communis Ricinus communis 1
YMR035W Species Saccharomyces cerevisiae Saccharomyces cerevisiae 1
YMR150C Species Saccharomyces cerevisiae Saccharomyces cerevisiae
121429 Species Selaginella moellendorffii Selaginella moellendorffii 1
18112 Species Selaginella moellendorffii Selaginella moellendorffii
272208 Species Selaginella moellendorffii Selaginella moellendorffii
47339 Species Selaginella moellendorffii Selaginella moellendorffii 1
58024 Species Selaginella moellendorffii Selaginella moellendorffii
85448 Species Selaginella moellendorffii Selaginella moellendorffii
86052 Species Selaginella moellendorffii Selaginella moellendorffii
91609 Species Selaginella moellendorffii Selaginella moellendorffii
PGSC0003DMG400000378|PGSC0003DMT400001021 Species Solanum tuberosum Solanum tuberosum
PGSC0003DMG400007080|PGSC0003DMT400018240 Species Solanum tuberosum Solanum tuberosum
PGSC0003DMG400008317|PGSC0003DMT400021433 Species Solanum tuberosum Solanum tuberosum 1
PGSC0003DMG401008489|PGSC0003DMT400021872 Species Solanum tuberosum Solanum tuberosum 1
PGSC0003DMG401011681|PGSC0003DMT400030498 Species Solanum tuberosum Solanum tuberosum
Vocar20005047m.g Species Volvox carteri Volvox carteri
Vocar20005591m.g Species Volvox carteri Volvox carteri 1
Vocar20008453m.g Species Volvox carteri Volvox carteri 3
GSVIVG01008821001|GSVIVT01008821001 Species Vitis vinifera Vitis vinifera 1
GSVIVG01009580001|GSVIVT01009580001 Species Vitis vinifera Vitis vinifera
GSVIVG01014071001|GSVIVT01014071001 Species Vitis vinifera Vitis vinifera
GSVIVG01015377001|GSVIVT01015377001 Species Vitis vinifera Vitis vinifera
GSVIVG01021415001|GSVIVT01021415001 Species Vitis vinifera Vitis vinifera 22
GSVIVG01033968001|GSVIVT01033968001 Species Vitis vinifera Vitis vinifera
GRMZM2G024865_T01 Species Zea mays Zea mays
GRMZM2G029141_T01 Species Zea mays Zea mays
GRMZM2G039930_T02 Species Zea mays Zea mays
GRMZM2G042164_T01 Species Zea mays Zea mays
GRMZM2G066469_T01 Species Zea mays Zea mays
GRMZM2G107798_T01 Species Zea mays Zea mays 1
GRMZM2G114557_T03 Species Zea mays Zea mays 1
GRMZM2G142938_T01 Species Zea mays Zea mays
GRMZM2G162274_T01 Species Zea mays Zea mays
GRMZM5G800751_T03 Species Zea mays Zea mays 1
GRMZM5G833660_T01 Species Zea mays Zea mays

Sequences (FASTA)