ARC Centre of Excellence for Plant Energy Biology

MPIC — IMP1,IMP2 Athena Promoter Motif Predictions

Putative and known regulatory elements within upstream regions of each gene were obtained from, and enable analysis of co-regulated genes sourced from, Athena: Arabidopsis thaliana a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences (O’Connor et al. 2005).

Locus Species Motif Pattern Start End Sense Sequence
At1g29960 Species Arabidopsis thaliana Arabidopsis thaliana MYB1ATWAACCA-195-190+TAACCA
At1g29960 Species Arabidopsis thaliana Arabidopsis thaliana MYB2ATTAACTG-167-162+TAACTG
At1g29960 Species Arabidopsis thaliana Arabidopsis thaliana T-box promoter motifACTTTG-54-49+ACTTTG
At1g29960 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-141-136+TATAAA
At1g29960 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-143-138-TTTATA
At3g08980 Species Arabidopsis thaliana Arabidopsis thaliana BoxII promoter motifGGTTAA-703-698-TTAACC
At3g08980 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-102-93+CATTTAAATG
At3g08980 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-102-93-CATTTAAATG
At3g08980 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-241-232+CTAATTTTAG
At3g08980 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-241-232-CTAATTTTAG
At3g08980 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-547-538+CTAATTTATG
At3g08980 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-547-538-CTAATTTATG
At3g08980 Species Arabidopsis thaliana Arabidopsis thaliana MYB1ATWAACCA-146-141-TGGTTT
At3g08980 Species Arabidopsis thaliana Arabidopsis thaliana MYB1ATWAACCA-176-171-TGGTTT
At3g08980 Species Arabidopsis thaliana Arabidopsis thaliana MYB1ATWAACCA-229-224-TGGTTT
At3g08980 Species Arabidopsis thaliana Arabidopsis thaliana MYB1ATWAACCA-590-585+AAACCA
At3g08980 Species Arabidopsis thaliana Arabidopsis thaliana MYB1ATWAACCA-70-65-TGGTTT
At3g08980 Species Arabidopsis thaliana Arabidopsis thaliana MYB1ATWAACCA-702-697+TAACCA
At3g08980 Species Arabidopsis thaliana Arabidopsis thaliana MYB2 binding site motifTAACTSGTT-195-187+TAACTGGTT
At3g08980 Species Arabidopsis thaliana Arabidopsis thaliana MYB2ATTAACTG-195-190+TAACTG
At3g08980 Species Arabidopsis thaliana Arabidopsis thaliana MYB2ATTAACTG-706-701-CAGTTA
At3g08980 Species Arabidopsis thaliana Arabidopsis thaliana RAV1-B binding site motifCACCTG-400-395+CACCTG
At3g08980 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-82-77+TATAAA
At3g08980 Species Arabidopsis thaliana Arabidopsis thaliana W-box promoter motifTTGACY-623-618+TTGACC

Sequences (FASTA)