ARC Centre of Excellence for Plant Energy Biology

MPIC — ICP55,ICP55A,ICP55B Transmembrane Helix Domain Predictions

Num_PredHel indicates the number of predicted transmembrane helix domains calculated by DAS and TMHMM predictors (for methods, see MPIC paper). A tally of both predictors is shown first.

Num_PredHel Frequency
1 3

1 predicted Species DAS_Num_PredHelTMHMM_Num_PredHel
AT1G09300 Species Arabidopsis thaliana Arabidopsis thaliana
AT4G29490 Species Arabidopsis thaliana Arabidopsis thaliana
Bra011117 Species Brassica rapa Brassica rapa
Bra030767 Species Brassica rapa Brassica rapa
gi|392884626 Species Caenorhabditis elegans Caenorhabditis elegans
NP_490843.1 Species Caenorhabditis elegans Caenorhabditis elegans
CMA107CT Species Cyanidioschyzon merolae Cyanidioschyzon merolae
Cre01.g046150.t1.3 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii
Cre02.g083065.t1.2 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii
Cre07.g342920.t1.2 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii
Carubv10007150m.g Species Capsella rubella Capsella rubella
Carubv10009008m.g Species Capsella rubella Capsella rubella
Cucsa.090530.1 Species Cucumis sativus Cucumis sativus
Cucsa.397160.1 Species Cucumis sativus Cucumis sativus
gi|66812452 Species Dictyostelium discoideum Dictyostelium discoideum
gi|66825133 Species Dictyostelium discoideum Dictyostelium discoideum
Eucgr.B01688.1 Species Eucalyptus grandis Eucalyptus grandis
Eucgr.C03666.1 Species Eucalyptus grandis Eucalyptus grandis
Eucgr.C03941.1 Species Eucalyptus grandis Eucalyptus grandis
Eucgr.L00254.1 Species Eucalyptus grandis Eucalyptus grandis
Esi0137_0095 Species Ectocarpus siliculosus Ectocarpus siliculosus
Glyma01g37350.1 Species Glycine max Glycine max 11
Glyma05g36260.1 Species Glycine max Glycine max
Glyma08g03391.1 Species Glycine max Glycine max
Glyma10g28690.1 Species Glycine max Glycine max
Glyma20g22820.1 Species Glycine max Glycine max
Glyma20g22820.2 Species Glycine max Glycine max
gi|11559925 Species Homo sapiens Homo sapiens
gi|149589008 Species Homo sapiens Homo sapiens
gi|260593663 Species Homo sapiens Homo sapiens
gi|260593665 Species Homo sapiens Homo sapiens
gi|530420285 Species Homo sapiens Homo sapiens
gi|530420287 Species Homo sapiens Homo sapiens
Medtr8g101720.1 Species Medicago truncatula Medicago truncatula
gi|164425919 Species Neurospora crassa Neurospora crassa
gi|164428892 Species Neurospora crassa Neurospora crassa
gi|85089070 Species Neurospora crassa Neurospora crassa
LOC_Os02g13140.1 Species Oryza sativa Oryza sativa
LOC_Os12g37640.1 Species Oryza sativa Oryza sativa
Phpat.012G034000.1 Species Physcomitrella patens Physcomitrella patens
Phpat.022G059200.1 Species Physcomitrella patens Physcomitrella patens
Phpat.1Z035600.1 Species Physcomitrella patens Physcomitrella patens
Potri.006G149500.1 Species Populus trichocarpa Populus trichocarpa
Potri.013G007100.1 Species Populus trichocarpa Populus trichocarpa
27490.m000041|27490.t000003 Species Ricinus communis Ricinus communis
29912.m005402|29912.t000128 Species Ricinus communis Ricinus communis
30128.m008929|30128.t000390 Species Ricinus communis Ricinus communis
YER078C Species Saccharomyces cerevisiae Saccharomyces cerevisiae
80851 Species Selaginella moellendorffii Selaginella moellendorffii 1
89300 Species Selaginella moellendorffii Selaginella moellendorffii
PGSC0003DMG400002792|PGSC0003DMT400007222 Species Solanum tuberosum Solanum tuberosum
Vocar20008388m.g Species Volvox carteri Volvox carteri
Vocar20010463m.g Species Volvox carteri Volvox carteri
Vocar20011350m.g Species Volvox carteri Volvox carteri
GSVIVG01015237001|GSVIVT01015237001 Species Vitis vinifera Vitis vinifera
GSVIVG01031262001|GSVIVT01031262001 Species Vitis vinifera Vitis vinifera
GRMZM2G021110_T01 Species Zea mays Zea mays
GRMZM2G135045_T01 Species Zea mays Zea mays

Sequences (FASTA)