MPIC
Sequences for Physcomitrella patens were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.
| Database | Detected | Description | Start | End | E-Value |
|---|---|---|---|---|---|
| InterPro | IPR003733 | Thiamine phosphate synthase: | |||
| Pfam | PF02581 | Thiamine monophosphate synthase/TENI | 261 | 344 | 1.8E-5 |
| InterPro | IPR006073 | GTP binding domain: | |||
| Pfam | PF01926 | 50S ribosome-binding GTPase | 553 | 685 | 2.6E-17 |
| InterPro | IPR013785 | Aldolase-type TIM barrel: | |||
| Gene3D | G3DSA:3.20.20.70 | 258 | 378 | 1.6E-8 | |
| InterPro | IPR022998 | Thiamin phosphate synthase superfamily: | |||
| SUPERFAMILY | SSF51391 | 262 | 343 | 0.0 | |
| InterPro | IPR027417 | P-loop containing nucleoside triphosphate hydrolase: | |||
| Gene3D | G3DSA:3.40.50.300 | 541 | 724 | 1.1E-24 | |
| SUPERFAMILY | SSF52540 | 543 | 726 | 0.0 | |
| InterPro | No IPR | Unintegrated signatures: | |||
| Coils | Coil | 1081 | 1109 | - | |
| Coils | Coil | 1049 | 1070 | - | |
| PANTHER | PTHR11649 | 445 | 1112 | 0.0 | |
| PANTHER | PTHR11649:SF36 | 445 | 1112 | 0.0 | |
| Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 1030 | 1114 | - |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 32 | 1011 | - |
| Phobius | SIGNAL_PEPTIDE | Signal peptide region | 1 | 31 | - |
| Phobius | SIGNAL_PEPTIDE_C_REGION | C-terminal region of a signal peptide. | 20 | 31 | - |
| Phobius | SIGNAL_PEPTIDE_H_REGION | Hydrophobic region of a signal peptide. | 9 | 19 | - |
| Phobius | SIGNAL_PEPTIDE_N_REGION | N-terminal region of a signal peptide. | 1 | 8 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 1012 | 1029 | - |
| SignalP_GRAM_POSITIVE | SignalP-TM | 1 | 31 | - | |
