MPIC
Sequences for Capsella rubella were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.
| Database | Detected | Description | Start | End | E-Value |
|---|---|---|---|---|---|
| InterPro | IPR003733 | Thiamine phosphate synthase: | |||
| Pfam | PF02581 | Thiamine monophosphate synthase/TENI | 98 | 177 | 6.1E-5 |
| InterPro | IPR006073 | GTP binding domain: | |||
| Pfam | PF01926 | 50S ribosome-binding GTPase | 369 | 502 | 7.2E-19 |
| InterPro | IPR013785 | Aldolase-type TIM barrel: | |||
| Gene3D | G3DSA:3.20.20.70 | 98 | 216 | 1.4E-7 | |
| InterPro | IPR022998 | Thiamin phosphate synthase superfamily: | |||
| SUPERFAMILY | SSF51391 | 98 | 177 | 0.0 | |
| InterPro | IPR027417 | P-loop containing nucleoside triphosphate hydrolase: | |||
| Gene3D | G3DSA:3.40.50.300 | 363 | 541 | 1.2E-23 | |
| SUPERFAMILY | SSF52540 | 357 | 542 | 0.0 | |
| InterPro | No IPR | Unintegrated signatures: | |||
| Coils | Coil | 509 | 530 | - | |
| PANTHER | PTHR11649 | 263 | 929 | 0.0 | |
| PANTHER | PTHR11649:SF36 | 263 | 929 | 0.0 | |
| Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 1 | 790 | - |
| Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 840 | 929 | - |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 815 | 819 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 791 | 814 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 820 | 839 | - |
