MPIC
Sequences for Brassica rapa were analysed by InterPro (Zdobnov and Apweiler 2001) using default settings.
| Database | Detected | Description | Start | End | E-Value |
|---|---|---|---|---|---|
| InterPro | IPR003733 | Thiamine phosphate synthase: | |||
| Pfam | PF02581 | Thiamine monophosphate synthase/TENI | 95 | 174 | 8.2E-5 |
| InterPro | IPR006073 | GTP binding domain: | |||
| Pfam | PF01926 | 50S ribosome-binding GTPase | 354 | 487 | 6.2E-19 |
| InterPro | IPR013785 | Aldolase-type TIM barrel: | |||
| Gene3D | G3DSA:3.20.20.70 | 95 | 210 | 1.8E-7 | |
| InterPro | IPR027417 | P-loop containing nucleoside triphosphate hydrolase: | |||
| Gene3D | G3DSA:3.40.50.300 | 344 | 526 | 6.7E-24 | |
| SUPERFAMILY | SSF52540 | 343 | 528 | 0.0 | |
| InterPro | No IPR | Unintegrated signatures: | |||
| PANTHER | PTHR11649 | 282 | 909 | 0.0 | |
| PANTHER | PTHR11649:SF36 | 282 | 909 | 0.0 | |
| Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 1 | 775 | - |
| Phobius | CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. | 825 | 909 | - |
| Phobius | NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 800 | 804 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 805 | 824 | - |
| Phobius | TRANSMEMBRANE | Region of a membrane-bound protein predicted to be embedded in the membrane. | 776 | 799 | - |
