ARC Centre of Excellence for Plant Energy Biology

MPIC — ERV1 Athena Promoter Motif Predictions

Putative and known regulatory elements within upstream regions of each gene were obtained from, and enable analysis of co-regulated genes sourced from, Athena: Arabidopsis thaliana a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences (O’Connor et al. 2005).

Locus Species Motif Pattern Start End Sense Sequence
At1g49880 Species Arabidopsis thaliana Arabidopsis thaliana AtMYC2 BS in RD22CACATG-75-70-CATGTG
At1g49880 Species Arabidopsis thaliana Arabidopsis thaliana Gap-box MotifCAAATGAA-350-343-TTCATTTG
At1g49880 Species Arabidopsis thaliana Arabidopsis thaliana GAREATTAACAAR-308-302-TTTGTTA
At1g49880 Species Arabidopsis thaliana Arabidopsis thaliana MYB1ATWAACCA-200-195+AAACCA
At1g49880 Species Arabidopsis thaliana Arabidopsis thaliana MYCATERD1CATGTG-75-70+CATGTG
At1g49880 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-57-52-TTTATA

Sequences (FASTA)