ARC Centre of Excellence for Plant Energy Biology

MPIC — B14.7 Transmembrane Helix Domain Predictions

Num_PredHel indicates the number of predicted transmembrane helix domains calculated by DAS and TMHMM predictors (for methods, see MPIC paper). A tally of both predictors is shown first.

Num_PredHel Frequency
1 5
2 14
3 15
4 6

3 predicted Species DAS_Num_PredHelTMHMM_Num_PredHel
At2g42210 Species Arabidopsis thaliana Arabidopsis thaliana 22
Bra004675 Species Brassica rapa Brassica rapa 43
Bra016890 Species Brassica rapa Brassica rapa 33
CMA128C Species Cyanidioschyzon merolae Cyanidioschyzon merolae 32
Carubv10024223m.g Species Capsella rubella Capsella rubella 33
Cucsa.242840.1 Species Cucumis sativus Cucumis sativus 22
Eucgr.A02439.1 Species Eucalyptus grandis Eucalyptus grandis 11
Glyma03g29880.3 Species Glycine max Glycine max 43
Glyma19g32780.1 Species Glycine max Glycine max 43
Medtr7g092890.3 Species Medicago truncatula Medicago truncatula 2
LOC_Os02g48610.1 Species Oryza sativa Oryza sativa 43
LOC_Os09g10740.1 Species Oryza sativa Oryza sativa 24
Phpat.005G082500.1 Species Physcomitrella patens Physcomitrella patens 32
Phpat.006G036500.1 Species Physcomitrella patens Physcomitrella patens 32
Potri.006G059300.1 Species Populus trichocarpa Populus trichocarpa 13
29269.m000246|29269.t000008 Species Ricinus communis Ricinus communis 23
D8RFR6_SELML|tr Species Selaginella moellendorffii Selaginella moellendorffii 1
PGSC0003DMG400011432|PGSC0003DMT400029746 Species Solanum tuberosum Solanum tuberosum 24
GSVIVG01033524001|GSVIVT01033524001 Species Vitis vinifera Vitis vinifera 12
GRMZM2G038375_T01 Species Zea mays Zea mays 22
GRMZM2G086935_T02 Species Zea mays Zea mays 33

Sequences (FASTA)