ARC Centre of Excellence for Plant Energy Biology

MPIC — UNKNOWN-PRAT-5 Transmembrane Helix Domain Predictions

Num_PredHel indicates the number of predicted transmembrane helix domains calculated by DAS and TMHMM predictors (for methods, see MPIC paper). A tally of both predictors is shown first.

Num_PredHel Frequency
1 5
2 14
3 1
4 3

2 predicted Species DAS_Num_PredHelTMHMM_Num_PredHel
AT3G25120 Species Arabidopsis thaliana Arabidopsis thaliana 22
Bra015100 Species Brassica rapa Brassica rapa 12
Bra032686 Species Brassica rapa Brassica rapa 1
Carubv10014714 Species Capsella rubella Capsella rubella 32
Cucsa.077990 Species Cucumis sativus Cucumis sativus 21
Eucgr.K02137 Species Eucalyptus grandis Eucalyptus grandis 22
Glyma17g16170 Species Glycine max Glycine max 2
Medtr8g012725.1 Species Medicago truncatula Medicago truncatula 2
LOC_Os04g30740 Species Oryza sativa Oryza sativa 12
Phpat.022G050400 Species Physcomitrella patens Physcomitrella patens 2
Potri.002G246000 Species Populus trichocarpa Populus trichocarpa 2
30217.m000255|30217.t000006 Species Ricinus communis Ricinus communis 2
426311 Species Selaginella moellendorffii Selaginella moellendorffii 44
PGSC0003DMG400022033|PGSC0003DMT400056658 Species Solanum tuberosum Solanum tuberosum 2
GSVIVG01003251001 Species Vitis vinifera Vitis vinifera 14
GRMZM2G076351 Species Zea mays Zea mays

Sequences (FASTA)