ARC Centre of Excellence for Plant Energy Biology

MPIC — UNKNOWN-PRAT-3,UNKNOWN-PRAT-4 Transmembrane Helix Domain Predictions

Num_PredHel indicates the number of predicted transmembrane helix domains calculated by DAS and TMHMM predictors (for methods, see MPIC paper). A tally of both predictors is shown first.

Num_PredHel Frequency
1 15

1 predicted Species DAS_Num_PredHelTMHMM_Num_PredHel
AT3G49560 Species Arabidopsis thaliana Arabidopsis thaliana
AT5G24650 Species Arabidopsis thaliana Arabidopsis thaliana
Bra009782 Species Brassica rapa Brassica rapa
Bra017976 Species Brassica rapa Brassica rapa
Bra025133 Species Brassica rapa Brassica rapa 11
Bra041064 Species Brassica rapa Brassica rapa
Cre03.g183100.t1.2 Species Chlamydomonas reinhardtii Chlamydomonas reinhardtii
Carubv10001771m.g Species Capsella rubella Capsella rubella
Carubv10017861m.g Species Capsella rubella Capsella rubella
Cucsa.202450.1 Species Cucumis sativus Cucumis sativus 1
Eucgr.A00976.1 Species Eucalyptus grandis Eucalyptus grandis 1
Eucgr.K00480.1 Species Eucalyptus grandis Eucalyptus grandis
Eucgr.K00528.1 Species Eucalyptus grandis Eucalyptus grandis
Glyma04g40360.1 Species Glycine max Glycine max
Glyma06g14420.1 Species Glycine max Glycine max 1
Medtr3g093380.1 Species Medicago truncatula Medicago truncatula 1
LOC_Os02g32530.1 Species Oryza sativa Oryza sativa
LOC_Os04g33220.1 Species Oryza sativa Oryza sativa 1
Phpat.016G075300.1 Species Physcomitrella patens Physcomitrella patens
Phpat.025G026700.1 Species Physcomitrella patens Physcomitrella patens 1
Potri.012G004600.1 Species Populus trichocarpa Populus trichocarpa 1
Potri.015G000600.1 Species Populus trichocarpa Populus trichocarpa 1
30154.m001133|30154.t000017 Species Ricinus communis Ricinus communis 1
81847 Species Selaginella moellendorffii Selaginella moellendorffii
PGSC0003DMG400000572|PGSC0003DMT400001542 Species Solanum tuberosum Solanum tuberosum 1
Vocar20007903m.g Species Volvox carteri Volvox carteri
GSVIVG01038683001|GSVIVT01038683001 Species Vitis vinifera Vitis vinifera 1
GRMZM2G010743_T01 Species Zea mays Zea mays 1
GRMZM2G089507_T01 Species Zea mays Zea mays
GRMZM2G473463_T01 Species Zea mays Zea mays 1

Sequences (FASTA)