ARC Centre of Excellence for Plant Energy Biology

MPIC — UNKNOWN-PRAT-3,UNKNOWN-PRAT-4 Athena Promoter Motif Predictions

Putative and known regulatory elements within upstream regions of each gene were obtained from, and enable analysis of co-regulated genes sourced from, Athena: Arabidopsis thaliana a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences (O’Connor et al. 2005).

Locus Species Motif Pattern Start End Sense Sequence
At3g49560 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-637-628+CTAAATTATG
At3g49560 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-637-628-CTAAATTATG
At3g49560 Species Arabidopsis thaliana Arabidopsis thaliana EveningElement promoter motifAAAATATCT-260-252+AAAATATCT
At3g49560 Species Arabidopsis thaliana Arabidopsis thaliana MYB1ATWAACCA-287-282+TAACCA
At3g49560 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-301-295-GTTTGTT
At3g49560 Species Arabidopsis thaliana Arabidopsis thaliana T-box promoter motifACTTTG-575-570+ACTTTG
At3g49560 Species Arabidopsis thaliana Arabidopsis thaliana T-box promoter motifACTTTG-789-784-CAAAGT
At3g49560 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-294-289-TTTATA
At3g49560 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-891-886-TTTATA
At5g24650 Species Arabidopsis thaliana Arabidopsis thaliana Ibox promoter motifGATAAG-17-12+GATAAG

Sequences (FASTA)