MPIC
Putative and known regulatory elements within upstream regions of each gene were obtained from, and enable analysis of co-regulated genes sourced from, Athena: Arabidopsis thaliana a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences (O’Connor et al. 2005).
| Locus | Species | Motif | Pattern | Start | End | Sense | Sequence |
|---|---|---|---|---|---|---|---|
At5g09420  |
Arabidopsis thaliana | ARF binding site motif | TGTCTC | -43 | -38 | + | TGTCTC |
| At5g09420 |
Arabidopsis thaliana | ATHB6 binding site motif | CAATTATTA | -233 | -225 | + | CAATTATTA |
| At5g09420 |
Arabidopsis thaliana | CArG promoter motif | CCWWWWWWGG | -621 | -612 | + | CCAAATTTGG |
| At5g09420 |
Arabidopsis thaliana | CArG promoter motif | CCWWWWWWGG | -621 | -612 | - | CCAAATTTGG |
| At5g09420 |
Arabidopsis thaliana | Gap-box Motif | CAAATGAA | -860 | -853 | - | TTCATTTG |
| At5g09420 |
Arabidopsis thaliana | MYB1AT | WAACCA | -605 | -600 | + | AAACCA |
| At5g09420 |
Arabidopsis thaliana | TATA-box Motif | TATAAA | -373 | -368 | + | TATAAA |
| At5g09420 |
Arabidopsis thaliana | TATA-box Motif | TATAAA | -592 | -587 | + | TATAAA |
| At5g09420 |
Arabidopsis thaliana | TATA-box Motif | TATAAA | -653 | -648 | + | TATAAA |
| At5g09420 |
Arabidopsis thaliana | TATA-box Motif | TATAAA | -752 | -747 | - | TTTATA |
| At5g09420 |
Arabidopsis thaliana | W-box promoter motif | TTGACY | -446 | -441 | + | TTGACT |
| At5g09420 |
Arabidopsis thaliana | W-box promoter motif | TTGACY | -731 | -726 | - | GGTCAA |
