ARC Centre of Excellence for Plant Energy Biology

MPIC — MgM1,MgM1A,MgM1B Athena Promoter Motif Predictions

Putative and known regulatory elements within upstream regions of each gene were obtained from, and enable analysis of co-regulated genes sourced from, Athena: Arabidopsis thaliana a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences (O’Connor et al. 2005).

Locus Species Motif Pattern Start End Sense Sequence
At2g14120 Species Arabidopsis thaliana Arabidopsis thaliana DRE core motifRCCGAC-391-386-GTCGGC
At2g14120 Species Arabidopsis thaliana Arabidopsis thaliana DRE core motifRCCGAC-461-456-GTCGGC
At2g14120 Species Arabidopsis thaliana Arabidopsis thaliana DRE core motifRCCGAC-496-491-GTCGGC
At2g14120 Species Arabidopsis thaliana Arabidopsis thaliana Hexamer promoter motifCCGTCG-591-586+CCGTCG
At2g14120 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-605-600+TATAAA
At2g14120 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-617-612+TATAAA
At2g14120 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-629-624+TATAAA
At2g14120 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-641-636+TATAAA
At4g33650 Species Arabidopsis thaliana Arabidopsis thaliana BoxII promoter motifGGTTAA-132-127+GGTTAA
At4g33650 Species Arabidopsis thaliana Arabidopsis thaliana BoxII promoter motifGGTTAA-569-564-TTAACC
At4g33650 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-268-259+CTAATATTAG
At4g33650 Species Arabidopsis thaliana Arabidopsis thaliana CARGCW8GATCWWWWWWWWG-268-259-CTAATATTAG
At4g33650 Species Arabidopsis thaliana Arabidopsis thaliana CCA1 binding site motifAAMAATCT-307-300-AGATTTTT
At4g33650 Species Arabidopsis thaliana Arabidopsis thaliana GAREATTAACAAR-100-94-TTTGTTA
At4g33650 Species Arabidopsis thaliana Arabidopsis thaliana GAREATTAACAAR-139-133+TAACAAA
At4g33650 Species Arabidopsis thaliana Arabidopsis thaliana Ibox promoter motifGATAAG-552-547-CTTATC
At4g33650 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-121-116+TATAAA
At4g33650 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-146-141+TATAAA
At4g33650 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-242-237+TATAAA
At4g33650 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-244-239-TTTATA

Sequences (FASTA)