ARC Centre of Excellence for Plant Energy Biology

MPIC — MDM1 Athena Promoter Motif Predictions

Putative and known regulatory elements within upstream regions of each gene were obtained from, and enable analysis of co-regulated genes sourced from, Athena: Arabidopsis thaliana a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences (O’Connor et al. 2005).

Locus Species Motif Pattern Start End Sense Sequence
At2g15900 Species Arabidopsis thaliana Arabidopsis thaliana ARF binding site motifTGTCTC-318-313+TGTCTC
At2g15900 Species Arabidopsis thaliana Arabidopsis thaliana ARF binding site motifTGTCTC-365-360-GAGACA
At2g15900 Species Arabidopsis thaliana Arabidopsis thaliana ARF binding site motifTGTCTC-930-925+TGTCTC
At2g15900 Species Arabidopsis thaliana Arabidopsis thaliana AtMYB2 BS in RD22CTAACCA-617-611-TGGTTAG
At2g15900 Species Arabidopsis thaliana Arabidopsis thaliana BoxII promoter motifGGTTAA-453-448+GGTTAA
At2g15900 Species Arabidopsis thaliana Arabidopsis thaliana BoxII promoter motifGGTTAA-518-513-TTAACC
At2g15900 Species Arabidopsis thaliana Arabidopsis thaliana GAREATTAACAAR-833-827-CTTGTTA
At2g15900 Species Arabidopsis thaliana Arabidopsis thaliana Ibox promoter motifGATAAG-430-425+GATAAG
At2g15900 Species Arabidopsis thaliana Arabidopsis thaliana Ibox promoter motifGATAAG-882-877-CTTATC
At2g15900 Species Arabidopsis thaliana Arabidopsis thaliana MYB binding site promoterMACCWAMC-891-884+AACCAACC
At2g15900 Species Arabidopsis thaliana Arabidopsis thaliana MYB1ATWAACCA-617-612-TGGTTA
At2g15900 Species Arabidopsis thaliana Arabidopsis thaliana MYB1ATWAACCA-670-665-TGGTTT
At2g15900 Species Arabidopsis thaliana Arabidopsis thaliana MYB4 binding site motifAMCWAMC-890-884+ACCAACC
At2g15900 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-842-837-TTTATA
At2g15900 Species Arabidopsis thaliana Arabidopsis thaliana TATA-box MotifTATAAA-977-972-TTTATA
At2g15900 Species Arabidopsis thaliana Arabidopsis thaliana W-box promoter motifTTGACY-485-480+TTGACT

Sequences (FASTA)