MPIC
Putative and known regulatory elements within upstream regions of each gene were obtained from, and enable analysis of co-regulated genes sourced from, Athena: Arabidopsis thaliana a resource for rapid visualization and systematic analysis of Arabidopsis promoter sequences (O’Connor et al. 2005).
| Locus | Species | Motif | Pattern | Start | End | Sense | Sequence |
|---|---|---|---|---|---|---|---|
At2g15900  |
Arabidopsis thaliana | ARF binding site motif | TGTCTC | -318 | -313 | + | TGTCTC |
| At2g15900 |
Arabidopsis thaliana | ARF binding site motif | TGTCTC | -365 | -360 | - | GAGACA |
| At2g15900 |
Arabidopsis thaliana | ARF binding site motif | TGTCTC | -930 | -925 | + | TGTCTC |
| At2g15900 |
Arabidopsis thaliana | AtMYB2 BS in RD22 | CTAACCA | -617 | -611 | - | TGGTTAG |
| At2g15900 |
Arabidopsis thaliana | BoxII promoter motif | GGTTAA | -453 | -448 | + | GGTTAA |
| At2g15900 |
Arabidopsis thaliana | BoxII promoter motif | GGTTAA | -518 | -513 | - | TTAACC |
| At2g15900 |
Arabidopsis thaliana | GAREAT | TAACAAR | -833 | -827 | - | CTTGTTA |
| At2g15900 |
Arabidopsis thaliana | Ibox promoter motif | GATAAG | -430 | -425 | + | GATAAG |
| At2g15900 |
Arabidopsis thaliana | Ibox promoter motif | GATAAG | -882 | -877 | - | CTTATC |
| At2g15900 |
Arabidopsis thaliana | MYB binding site promoter | MACCWAMC | -891 | -884 | + | AACCAACC |
| At2g15900 |
Arabidopsis thaliana | MYB1AT | WAACCA | -617 | -612 | - | TGGTTA |
| At2g15900 |
Arabidopsis thaliana | MYB1AT | WAACCA | -670 | -665 | - | TGGTTT |
| At2g15900 |
Arabidopsis thaliana | MYB4 binding site motif | AMCWAMC | -890 | -884 | + | ACCAACC |
| At2g15900 |
Arabidopsis thaliana | TATA-box Motif | TATAAA | -842 | -837 | - | TTTATA |
| At2g15900 |
Arabidopsis thaliana | TATA-box Motif | TATAAA | -977 | -972 | - | TTTATA |
| At2g15900 |
Arabidopsis thaliana | W-box promoter motif | TTGACY | -485 | -480 | + | TTGACT |
