ARC Centre of Excellence for Plant Energy Biology

Development draft version
Draft staging — under embargo.
Data refresh may occur without notice.

MPIC • Mitochondrial Protein Import Components

25+ 24 75 Component
Families
126 Homologues
Identified
2211 Gene IDs Found
Show All

Experimentally-known orthologues and BLAST homologues of Arabidopsis thaliana and Saccharomyces cerevisiae have been collated for MPIC. Click any component icon or numbered family member on the interactive diagram to search for corresponding loci. Species of interest can be included in MPIC search results by ticking their names in the left-hand panel.

Citation: Murcha et al. (2014) MPIC: A Mitochondrial Protein Import Components Database for Plant and Non-Plant Species. Plant Cell Physiol, DOI: 10.1093/pcp/pcu186

About MPIC Features

MW
Theoretical molecular weight (Daltons) calculated by ExPASY.
AA
Amino acid count (sequence length) of protein peptide.
pI
Theoretical isoelectric point (pI) calculated by ExPASY.
E-values
E-value significance denotes nucleotide alignment between A. thaliana/S. cerevisiae models and other species via TBLASTN. Additional putative orthologues via HMMER and NCBI Protein are noted as such.
Orthology – FASTA files
FASTA files are viewable for each component and contain all species included in MPIC, grouped by species. Species name abbreviations are shown in the left-hand column above.
Alignments
Data available visually and in systematic data formats.
Trees
Click on locus identifiers to view protein details. Models outlined in red.
MatGAT+
Interactive MatGAT (point / click to highlight corresponding genes). Species icons shown.
Domains
Consensus among multiple species collated. Hand-drawn conserved domains are shown.
Expression
Heatmaps of expression across developmental stages of A. thaliana and O. sativa, plus global expression spreadsheets.
Targeting
Consensus among multiple species and predictors has been collated.
GelMap
GelMaps open directly but you’ll need to manually search for the MPIC once you get to the GelMap site.